RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g25060.1 View Network Show in Genome Browser |
| Other Names | Os08g0338200 |
| Description | BSD domain-containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 15203190-15211952 Nucleotide Length: 1815 |
| Protein-coding | LOC_Os08g25060 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g42990 LOC_Os02g03340 LOC_Os01g16670 LOC_Os03g52750 LOC_Os01g49680 LOC_Os05g05260 LOC_Os07g45310 LOC_Os03g10780 LOC_Os05g32600 LOC_Os04g58350 LOC_Os01g23630 More.. |
| Downstream Genes | LOC_Os08g25460 LOC_Os10g25770 LOC_Os08g33082 LOC_Os12g09280 LOC_Os12g39070 LOC_Os09g36440 LOC_Os10g35290 LOC_Os12g07720 LOC_Os11g36390 LOC_Os11g28350 LOC_Os08g33340 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g25060.1 |
| Rice Genome Annotation | LOC_Os08g25060.1 |
| Ricechip | LOC_Os08g25060.1 |
| KEGG | osa:4345313 dosa:Os08t0338200-01 |
| Entrez-Gene | 4345313 |