RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g25090.2 View Network Show in Genome Browser |
| Other Names | Os08g0338700 |
| Description | co-chaperone GrpE protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 15232850-15236364 Nucleotide Length: 936 |
| Protein-coding | LOC_Os08g25090 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g53420 LOC_Os03g02260 LOC_Os06g02620 LOC_Os07g22700 LOC_Os03g60620 LOC_Os03g16860 LOC_Os05g38530 LOC_Os01g62290 LOC_Os02g43930 LOC_Os05g26926 LOC_Os05g26902 More.. |
| Downstream Genes | LOC_Os09g31486 LOC_Os12g07060 LOC_Os11g47760 LOC_Os12g05760 LOC_Os11g08460 LOC_Os11g08440 LOC_Os11g08470 LOC_Os12g14070 LOC_Os10g36370 LOC_Os12g38180 LOC_Os09g32050 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g25090.2 |
| Rice Genome Annotation | LOC_Os08g25090.2 |
| Ricechip | LOC_Os08g25090.2 |
| KEGG | osa:4345316 dosa:Os08t0338700-01 |
| Entrez-Gene | 4345316 |