RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g25130.1 View Network Show in Genome Browser |
| Other Names | Os08g0338900 |
| Description | enhancer of polycomb, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 15256028-15267417 Nucleotide Length: 1362 |
| Protein-coding | LOC_Os08g25130 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g43360 LOC_Os06g04580 LOC_Os05g46330 LOC_Os04g01130 LOC_Os03g04980 LOC_Os07g45064 LOC_Os07g22220 LOC_Os07g36140 LOC_Os06g08770 LOC_Os03g51200 LOC_Os02g56300 More.. |
| Downstream Genes | LOC_Os11g34300 LOC_Os12g34510 LOC_Os08g33100 LOC_Os12g25120 LOC_Os12g13570 LOC_Os10g39410 LOC_Os09g38020 LOC_Os09g26340 LOC_Os10g11200 LOC_Os11g06390 LOC_Os10g36650 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g25130.1 |
| Rice Genome Annotation | LOC_Os08g25130.1 |
| Ricechip | LOC_Os08g25130.1 |
| KEGG | osa:4345317 dosa:Os08t0338900-01 |
| Entrez-Gene | 4345317 |