RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g25590.2 View Network Show in Genome Browser |
| Other Names | Os08g0344300 |
| Description | UPF0041 domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 15571161-15574550 Nucleotide Length: 330 |
| Protein-coding | LOC_Os08g25590 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g74000 LOC_Os05g31290 LOC_Os03g48000 LOC_Os04g59560 LOC_Os03g22950 LOC_Os07g44710 LOC_Os01g25370 LOC_Os05g38530 LOC_Os03g16860 LOC_Os02g47410 LOC_Os02g41550 More.. |
| Downstream Genes | LOC_Os08g44770 LOC_Os10g41930 LOC_Os10g30300 LOC_Os12g12860 LOC_Os10g11140 LOC_Os11g47760 LOC_Os12g08280 LOC_Os10g17280 LOC_Os09g38030 LOC_Os11g03670 LOC_Os09g33780 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g25590.2 |
| Rice Genome Annotation | LOC_Os08g25590.2 |
| Ricechip | LOC_Os08g25590.2 |
| KEGG | osa:4345333 dosa:Os08t0344300-01 |
| Entrez-Gene | 4345333 |