RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g25890.1 View Network Show in Genome Browser |
| Other Names | Os08g0347500 |
| Description | tetratricopeptide repeat, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 15766183-15766965 Nucleotide Length: 390 |
| Protein-coding | LOC_Os08g25890 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0015979 | photosynthesis | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g11550 LOC_Os01g43030 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g25890.1 |
| Rice Genome Annotation | LOC_Os08g25890.1 |
| Ricechip | LOC_Os08g25890.1 |
| KEGG | osa:4345346 dosa:Os08t0347500-00 |
| Entrez-Gene | 4345346 |