RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g26870.5 View Network Show in Genome Browser |
| Other Names | Os08g0357000 |
| Description | wound responsive protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 16340333-16345287 Nucleotide Length: 954 |
| Protein-coding | LOC_Os08g26870 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0004518 | nuclease activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g52500 LOC_Os02g19150 LOC_Os06g45480 LOC_Os02g39970 LOC_Os01g27940 LOC_Os01g71720 LOC_Os05g49380 LOC_Os01g01160 LOC_Os06g15990 LOC_Os07g43560 LOC_Os05g35470 More.. |
| Downstream Genes | LOC_Os09g23110 LOC_Os08g43190 LOC_Os12g32240 LOC_Os09g37620 LOC_Os09g36040 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR172c |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g26870.5 |
| Rice Genome Annotation | LOC_Os08g26870.5 |
| Ricechip | LOC_Os08g26870.5 |
| KEGG | osa:4345362 dosa:Os08t0357000-02 |
| Entrez-Gene | 4345362 |