RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g27010.1 View Network Show in Genome Browser |
| Other Names | Os08g0359000 |
| Description | APE1, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 16506115-16510326 Nucleotide Length: 816 |
| Protein-coding | LOC_Os08g27010 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g42960 LOC_Os07g06450 LOC_Os04g43420 LOC_Os02g49326 LOC_Os01g13570 LOC_Os03g17070 |
| Downstream Genes | LOC_Os12g08730 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g27010.1 |
| Rice Genome Annotation | LOC_Os08g27010.1 |
| Ricechip | LOC_Os08g27010.1 |
| KEGG | osa:4345365 dosa:Os08t0359000-01 |
| Entrez-Gene | 4345365 |