RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g27040.1 View Network Show in Genome Browser |
| Other Names | Os08g0359200 |
| Description | lipid phosphatase protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 16519419-16523966 Nucleotide Length: 933 |
| Protein-coding | LOC_Os08g27040 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g59070 LOC_Os03g17940 LOC_Os02g44290 LOC_Os08g03370 LOC_Os05g45770 LOC_Os02g47570 LOC_Os01g67560 LOC_Os01g09370 LOC_Os08g02904 LOC_Os08g02900 LOC_Os03g21690 More.. |
| Downstream Genes | LOC_Os12g13290 LOC_Os09g27970 LOC_Os11g34360 LOC_Os12g13320 LOC_Os10g10244 LOC_Os09g26830 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR396a-3p osa-miR396b-3p |
| Pathways | |
|---|---|
| Metacyc Pathways | PHOSLIPSYN2-PWY TRIGLSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g27040.1 |
| Rice Genome Annotation | LOC_Os08g27040.1 |
| Ricechip | LOC_Os08g27040.1 |
| KEGG | osa:4345367 dosa:Os08t0359200-02 |
| Entrez-Gene | 4345367 |