RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g27824.1 View Network Show in Genome Browser |
| Other Names | Os08g0365900 |
| Description | NOL1/NOP2/sun family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 16946485-16959993 Nucleotide Length: 1770 |
| Protein-coding | LOC_Os08g27824 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g47420 LOC_Os01g21180 LOC_Os07g44190 LOC_Os02g07740 LOC_Os03g25450 LOC_Os01g49330 LOC_Os02g35160 LOC_Os01g70970 LOC_Os07g40630 LOC_Os04g01320 LOC_Os07g49240 More.. |
| Downstream Genes | LOC_Os09g32810 LOC_Os08g39220 LOC_Os09g27350 LOC_Os11g14050 LOC_Os09g14580 LOC_Os09g38850 LOC_Os11g38850 LOC_Os12g38860 LOC_Os12g16520 LOC_Os12g06670 LOC_Os08g39240 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g27824.1 |
| Rice Genome Annotation | LOC_Os08g27824.1 |
| Ricechip | LOC_Os08g27824.1 |
| KEGG | osa:4345386 dosa:Os08t0365900-01 |
| Entrez-Gene | 4345386 |