RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g27840.2 View Network Show in Genome Browser |
| Other Names | Os08g0366000 |
| Description | phosphoenolpyruvate carboxylase, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 16964694-16970023 Nucleotide Length: 2655 |
| Protein-coding | LOC_Os08g27840 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0007154 | cell communication | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0009991 | response to extracellular stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g60976 LOC_Os03g60992 LOC_Os03g19280 LOC_Os03g51430 LOC_Os06g34040 LOC_Os03g42110 LOC_Os04g58090 LOC_Os02g47110 LOC_Os03g54790 |
| Downstream Genes | LOC_Os10g35170 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g27840.2 |
| Rice Genome Annotation | LOC_Os08g27840.2 |
| Ricechip | LOC_Os08g27840.2 |
| KEGG | osa:4345387 dosa:Os08t0366000-01 |
| Entrez-Gene | 4345387 |