RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g27850.2 View Network Show in Genome Browser |
| Other Names | Os08g0366100 |
| Description | endothelial differentiation-related factor 1, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 16982274-16985504 Nucleotide Length: 354 |
| Protein-coding | LOC_Os08g27850 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g48810 LOC_Os03g44150 LOC_Os07g48780 LOC_Os05g41210 LOC_Os03g20370 LOC_Os01g16240 LOC_Os01g17190 LOC_Os02g20394 LOC_Os07g49400 LOC_Os01g13760 LOC_Os04g35090 More.. |
| Downstream Genes | LOC_Os09g30418 LOC_Os09g30412 LOC_Os08g39140 LOC_Os10g32550 LOC_Os12g39070 LOC_Os11g08940 LOC_Os11g05570 LOC_Os12g02730 LOC_Os11g30500 LOC_Os10g29660 LOC_Os10g34670 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g27850.2 |
| Rice Genome Annotation | LOC_Os08g27850.2 |
| Ricechip | LOC_Os08g27850.2 |
| KEGG | osa:4345388 dosa:Os08t0366100-01 |
| Entrez-Gene | 4345388 |