RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g28214.6 View Network Show in Genome Browser |
| Other Names | Os08g0369600 |
| Description | tesmin/TSO1-like CXC domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 17217571-17221240 Nucleotide Length: 1113 |
| Protein-coding | LOC_Os08g28214 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os11g32900 LOC_Os08g42600 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2099-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g28214.6 |
| Rice Genome Annotation | LOC_Os08g28214.6 |
| Ricechip | LOC_Os08g28214.6 |
| KEGG | osa:4345404 dosa:Os08t0369600-01 |
| Entrez-Gene | 4345404 |