RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g28680.1 View Network Show in Genome Browser |
| Other Names | Os08g0374100 |
| Description | ubiquitin-conjugating enzyme, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 17513006-17516101 Nucleotide Length: 552 |
| Protein-coding | LOC_Os08g28680 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g60550 LOC_Os01g70140 LOC_Os07g07240 LOC_Os03g57790 LOC_Os05g08960 LOC_Os03g13170 LOC_Os06g46770 LOC_Os05g42424 LOC_Os02g06640 LOC_Os05g06770 LOC_Os01g22490 More.. |
| Downstream Genes | LOC_Os09g39500 LOC_Os10g39120 LOC_Os09g12570 LOC_Os09g12230 LOC_Os12g41220 LOC_Os11g38900 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g28680.1 |
| Rice Genome Annotation | LOC_Os08g28680.1 |
| Ricechip | LOC_Os08g28680.1 |
| KEGG | osa:4345411 dosa:Os08t0374100-01 |
| Entrez-Gene | 4345411 |