RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g28700.1 View Network Show in Genome Browser |
| Other Names | Os08g0374400 |
| Description | dnaJ domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 17538199-17540911 Nucleotide Length: 1035 |
| Protein-coding | LOC_Os08g28700 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g38530 LOC_Os03g16860 LOC_Os01g62290 LOC_Os03g60620 LOC_Os05g30480 LOC_Os03g16920 LOC_Os03g02260 LOC_Os01g49430 LOC_Os03g50250 LOC_Os06g10990 LOC_Os02g02410 More.. |
| Downstream Genes | LOC_Os11g47760 LOC_Os11g08440 LOC_Os11g08460 LOC_Os09g31486 LOC_Os12g05760 LOC_Os11g08470 LOC_Os12g14070 LOC_Os12g38180 LOC_Os09g11250 LOC_Os08g36150 LOC_Os09g30418 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5809 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g28700.1 |
| Rice Genome Annotation | LOC_Os08g28700.1 |
| Ricechip | LOC_Os08g28700.1 |
| KEGG | osa:4345413 dosa:Os08t0374400-00 |
| Entrez-Gene | 4345413 |