RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os08g28820.1 View Network Show in Genome Browser
Other Names	Os08g0375700
Description	Skp1 family, dimerisation domain containing protein, expressed
Gene Attributes	Chromosome: Chr8 CDS Coordinates (5'-3'): 17625214-17625944 Nucleotide Length: 510
Protein-coding	LOC_Os08g28820

Gene Ontology Classification
GO	Name	Type	Code
GO:0008150	biological_process	Biological Process	IEA
GO:0009056	catabolic process	Biological Process	IEA
GO:0007049	cell cycle	Biological Process	IEA
GO:0016043	cellular component organization	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0006259	DNA metabolic process	Biological Process	IEA
GO:0019538	protein metabolic process	Biological Process	IEA
GO:0006464	protein modification process	Biological Process	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0005737	cytoplasm	Cellular Component	IEA
GO:0005856	cytoskeleton	Cellular Component	IEA
GO:0005829	cytosol	Cellular Component	IEA
GO:0005622	intracellular	Cellular Component	IEA
GO:0005634	nucleus	Cellular Component	IEA
GO:0005886	plasma membrane	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os01g27160 LOC_Os02g47870 LOC_Os01g27150 LOC_Os05g05700 LOC_Os04g56070 LOC_Os01g43540 LOC_Os05g13300 LOC_Os01g01700 LOC_Os02g15220 LOC_Os07g49150 LOC_Os08g28800 More..
Downstream Genes	LOC_Os11g48030 LOC_Os11g42160 LOC_Os11g26910 LOC_Os09g36830 LOC_Os10g05800 LOC_Os09g10200 LOC_Os09g10260 LOC_Os12g08280 LOC_Os09g10270 LOC_Os09g12290 LOC_Os11g01780 More..

Database Links
Gramene	LOC_Os08g28820.1
Rice Genome Annotation	LOC_Os08g28820.1
Ricechip	LOC_Os08g28820.1
KEGG	osa:4345419 dosa:Os08t0375700-00
Entrez-Gene	4345419