RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g28840.1 View Network Show in Genome Browser |
| Other Names | Os08g0375900 |
| Description | hydrolase, NUDIX family, domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 17634789-17638483 Nucleotide Length: 753 |
| Protein-coding | LOC_Os08g28840 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g36190 LOC_Os02g50130 LOC_Os03g59580 LOC_Os02g32060 LOC_Os06g14420 LOC_Os06g04910 LOC_Os04g46280 LOC_Os02g56210 LOC_Os05g34180 LOC_Os06g03910 LOC_Os04g58900 More.. |
| Downstream Genes | LOC_Os09g15340 LOC_Os11g32750 LOC_Os12g10850 LOC_Os12g10910 LOC_Os09g20820 LOC_Os08g34720 LOC_Os08g39880 LOC_Os11g16580 LOC_Os12g09000 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g28840.1 |
| Rice Genome Annotation | LOC_Os08g28840.1 |
| Ricechip | LOC_Os08g28840.1 |
| KEGG | osa:4345421 dosa:Os08t0375900-02 |
| Entrez-Gene | 4345421 |