RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g28980.1 View Network Show in Genome Browser |
| Other Names | Os08g0377400 |
| Description | exonuclease, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 17730432-17734809 Nucleotide Length: 861 |
| Protein-coding | LOC_Os08g28980 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0004518 | nuclease activity | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g43140 LOC_Os03g61560 LOC_Os02g26850 LOC_Os07g33340 LOC_Os03g23020 LOC_Os03g52470 LOC_Os03g22350 LOC_Os02g26660 LOC_Os04g52200 LOC_Os02g50370 LOC_Os01g13730 More.. |
| Downstream Genes | LOC_Os08g31810 LOC_Os11g16480 LOC_Os09g19560 LOC_Os12g09280 LOC_Os10g31520 LOC_Os10g25110 LOC_Os12g03822 LOC_Os11g03990 LOC_Os09g18320 LOC_Os12g36950 LOC_Os11g01420 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g28980.1 |
| Rice Genome Annotation | LOC_Os08g28980.1 |
| Ricechip | LOC_Os08g28980.1 |
| KEGG | osa:4345430 dosa:Os08t0377400-01 |
| Entrez-Gene | 4345430 |