RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g29100.1 View Network Show in Genome Browser |
| Other Names | Os08g0378800 |
| Description | SAM domain family protein, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 17814498-17817628 Nucleotide Length: 708 |
| Protein-coding | LOC_Os08g29100 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g63320 LOC_Os04g39090 LOC_Os01g72520 |
| Downstream Genes | LOC_Os12g32992 LOC_Os09g26760 LOC_Os08g33910 LOC_Os12g42520 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g29100.1 |
| Rice Genome Annotation | LOC_Os08g29100.1 |
| Ricechip | LOC_Os08g29100.1 |
| KEGG | osa:4345434 dosa:Os08t0378800-01 |
| Entrez-Gene | 4345434 |