RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g29110.1 View Network Show in Genome Browser |
| Other Names | Os08g0378900 |
| Description | thioredoxin, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 17818423-17820085 Nucleotide Length: 570 |
| Protein-coding | LOC_Os08g29110 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0019725 | cellular homeostasis | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g54360 LOC_Os03g55820 LOC_Os06g39906 LOC_Os05g35540 LOC_Os05g47930 LOC_Os05g49220 LOC_Os02g35900 LOC_Os01g42960 LOC_Os06g06790 LOC_Os03g17860 LOC_Os02g51480 More.. |
| Downstream Genes | LOC_Os11g02450 LOC_Os11g34210 LOC_Os11g41910 LOC_Os10g36860 LOC_Os11g23790 LOC_Os10g30300 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g29110.1 |
| Rice Genome Annotation | LOC_Os08g29110.1 |
| Ricechip | LOC_Os08g29110.1 |
| KEGG | osa:4345435 dosa:Os08t0378900-01 |
| Entrez-Gene | 4345435 |