RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g29150.1 View Network Show in Genome Browser |
| Other Names | Os08g0379200 |
| Description | phospholipid-transporting ATPase, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 17844189-17850916 Nucleotide Length: 3516 |
| Protein-coding | LOC_Os08g29150 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g33390 LOC_Os04g58580 LOC_Os05g05220 LOC_Os03g06350 LOC_Os06g37440 LOC_Os07g37100 LOC_Os01g54670 LOC_Os01g09460 LOC_Os07g37110 LOC_Os08g21760 LOC_Os07g16950 More.. |
| Downstream Genes | LOC_Os12g29660 LOC_Os10g37420 LOC_Os09g07510 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g29150.1 |
| Rice Genome Annotation | LOC_Os08g29150.1 |
| Ricechip | LOC_Os08g29150.1 |
| KEGG | osa:4345437 dosa:Os08t0379200-01 |
| Entrez-Gene | 4345437 |