RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g29200.1 View Network Show in Genome Browser |
| Other Names | Os08g0380100 |
| Description | BURP domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 17904215-17906771 Nucleotide Length: 1884 |
| Protein-coding | LOC_Os08g29200 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g08790 LOC_Os06g20320 LOC_Os03g11230 LOC_Os02g30420 LOC_Os08g25900 LOC_Os03g36540 LOC_Os06g43900 LOC_Os02g43600 LOC_Os02g38240 LOC_Os06g09610 LOC_Os01g54540 More.. |
| Downstream Genes | LOC_Os09g32988 LOC_Os10g19880 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR166i-5p |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-1081 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g29200.1 |
| Rice Genome Annotation | LOC_Os08g29200.1 |
| Ricechip | LOC_Os08g29200.1 |
| KEGG | osa:4345440 dosa:Os08t0380100-01 |
| Entrez-Gene | 4345440 |