RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g29570.1 View Network Show in Genome Browser |
| Other Names | Os08g0384500 |
| Description | pleiotropic drug resistance protein 3, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 18128534-18133057 Nucleotide Length: 2376 |
| Protein-coding | LOC_Os08g29570 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g51060 LOC_Os03g16390 LOC_Os08g25010 LOC_Os07g44710 LOC_Os01g49320 LOC_Os04g56110 LOC_Os03g25070 LOC_Os02g16630 LOC_Os02g32690 LOC_Os01g04260 LOC_Os04g52900 More.. |
| Downstream Genes | LOC_Os08g37660 LOC_Os11g12340 LOC_Os12g12860 LOC_Os09g16380 LOC_Os10g42040 LOC_Os10g36710 LOC_Os08g42750 LOC_Os09g33910 LOC_Os10g33140 LOC_Os12g13720 LOC_Os11g37700 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g29570.1 |
| Rice Genome Annotation | LOC_Os08g29570.1 |
| Ricechip | LOC_Os08g29570.1 |
| KEGG | osa:4345450 dosa:Os08t0384500-01 |
| Entrez-Gene | 4345450 |