RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g29650.1 View Network Show in Genome Browser |
| Other Names | Os08g0385900 |
| Description | RNA recognition motif containing protein, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 18189406-18195742 Nucleotide Length: 840 |
| Protein-coding | LOC_Os08g29650 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g63920 LOC_Os01g39630 LOC_Os03g25770 LOC_Os07g47630 LOC_Os01g72890 LOC_Os02g39720 LOC_Os02g43760 LOC_Os03g10120 LOC_Os06g51220 LOC_Os07g32400 LOC_Os07g43950 More.. |
| Downstream Genes | LOC_Os08g37960 LOC_Os12g43370 LOC_Os10g06130 LOC_Os10g33770 LOC_Os11g14430 LOC_Os08g42910 LOC_Os10g26280 LOC_Os11g08660 LOC_Os11g45590 LOC_Os08g40880 LOC_Os11g41820 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g29650.1 |
| Rice Genome Annotation | LOC_Os08g29650.1 |
| Ricechip | LOC_Os08g29650.1 |
| KEGG | osa:4345455 dosa:Os08t0385900-01 |
| Entrez-Gene | 4345455 |