RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g29720.1 View Network Show in Genome Browser |
| Other Names | Os08g0386800 |
| Description | mitochondrial carrier protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 18251997-18257511 Nucleotide Length: 1245 |
| Protein-coding | LOC_Os08g29720 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g68770 LOC_Os02g48720 LOC_Os05g23720 LOC_Os03g49580 LOC_Os05g37434 LOC_Os07g39870 LOC_Os03g63420 LOC_Os07g07240 LOC_Os05g08960 LOC_Os03g57790 LOC_Os03g18550 More.. |
| Downstream Genes | LOC_Os10g42299 LOC_Os10g26130 LOC_Os11g43960 LOC_Os08g44260 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR3979-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g29720.1 |
| Rice Genome Annotation | LOC_Os08g29720.1 |
| Ricechip | LOC_Os08g29720.1 |
| KEGG | osa:4345459 dosa:Os08t0386800-01 |
| Entrez-Gene | 4345459 |