RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g29730.1 View Network Show in Genome Browser |
| Other Names | Os08g0386900 |
| Description | intracellular protein transport protein USO1-related, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 18265647-18269554 Nucleotide Length: 1458 |
| Protein-coding | LOC_Os08g29730 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g58290 LOC_Os02g55410 LOC_Os03g13790 LOC_Os02g29530 LOC_Os06g20610 |
| Downstream Genes | LOC_Os09g32020 LOC_Os12g35350 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g29730.1 |
| Rice Genome Annotation | LOC_Os08g29730.1 |
| Ricechip | LOC_Os08g29730.1 |
| KEGG | osa:4345460 dosa:Os08t0386900-01 |
| Entrez-Gene | 4345460 |