RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g30060.1 View Network Show in Genome Browser |
| Other Names | Os08g0390000 |
| Description | proton pump interactor, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 18474167-18480852 Nucleotide Length: 1866 |
| Protein-coding | LOC_Os08g30060 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g48700 LOC_Os07g26974 LOC_Os05g15140 LOC_Os04g37960 LOC_Os01g55280 LOC_Os04g56160 LOC_Os03g43020 LOC_Os02g26440 LOC_Os02g14860 |
| Downstream Genes | LOC_Os12g37590 LOC_Os12g30060 LOC_Os11g36050 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g30060.1 |
| Rice Genome Annotation | LOC_Os08g30060.1 |
| Ricechip | LOC_Os08g30060.1 |
| KEGG | osa:4345473 dosa:Os08t0390000-01 |
| Entrez-Gene | 4345473 |