RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g30740.1 View Network Show in Genome Browser |
| Other Names | Os08g0398000 |
| Description | ABC transporter, ATP-binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 18960124-18966338 Nucleotide Length: 2907 |
| Protein-coding | LOC_Os08g30740 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g31550 LOC_Os02g58730 LOC_Os02g20850 LOC_Os02g02840 LOC_Os02g50860 LOC_Os06g12790 LOC_Os05g43820 LOC_Os01g12900 LOC_Os03g27250 LOC_Os03g13400 LOC_Os01g14010 More.. |
| Downstream Genes | LOC_Os08g41830 LOC_Os12g25630 LOC_Os09g27650 LOC_Os08g36390 LOC_Os10g28330 LOC_Os09g38340 LOC_Os08g44050 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g30740.1 |
| Rice Genome Annotation | LOC_Os08g30740.1 |
| Ricechip | LOC_Os08g30740.1 |
| KEGG | osa:4345497 dosa:Os08t0398000-01 |
| Entrez-Gene | 4345497 |