RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g31140.1 View Network Show in Genome Browser |
| Other Names | Os08g0403300 |
| Description | heavy metal-associated domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 19244362-19245760 Nucleotide Length: 453 |
| Protein-coding | LOC_Os08g31140 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g13800 LOC_Os06g18790 LOC_Os05g42060 LOC_Os04g44354 LOC_Os03g60960 LOC_Os01g59110 LOC_Os01g53420 LOC_Os01g53380 LOC_Os01g53350 LOC_Os04g48410 LOC_Os01g53370 More.. |
| Downstream Genes | LOC_Os10g18530 LOC_Os09g34230 LOC_Os08g38160 LOC_Os10g18480 LOC_Os10g18510 LOC_Os08g38130 LOC_Os09g34250 LOC_Os09g34270 LOC_Os09g34214 LOC_Os10g17489 LOC_Os09g30980 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g31140.1 |
| Rice Genome Annotation | LOC_Os08g31140.1 |
| Ricechip | LOC_Os08g31140.1 |
| KEGG | osa:4345520 dosa:Os08t0403300-00 |
| Entrez-Gene | 4345520 |