RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g31219.1 View Network Show in Genome Browser |
| Other Names | Os08g0404200 |
| Description | ribosomal protein L27, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 19304739-19306021 Nucleotide Length: 438 |
| Protein-coding | LOC_Os08g31219 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g48410 LOC_Os02g15900 LOC_Os07g43470 LOC_Os03g58540 LOC_Os08g06230 LOC_Os07g47300 LOC_Os05g28940 LOC_Os05g50550 LOC_Os06g46450 LOC_Os06g19640 LOC_Os08g09370 More.. |
| Downstream Genes | LOC_Os11g47800 LOC_Os12g17320 LOC_Os09g19954 LOC_Os08g40610 LOC_Os09g32274 LOC_Os11g38670 LOC_Os08g44260 LOC_Os09g32030 LOC_Os12g43630 LOC_Os08g33720 LOC_Os12g31380 More.. |
| Reference | |
|---|---|
| PubMed | 20878142 20080642 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g31219.1 |
| Rice Genome Annotation | LOC_Os08g31219.1 |
| Ricechip | LOC_Os08g31219.1 |
| KEGG | dosa:Os08t0404200-00 |