RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g31560.1 View Network Show in Genome Browser |
| Other Names | Os08g0408200 |
| Description | WD-40 repeat family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 19522096-19528779 Nucleotide Length: 1335 |
| Protein-coding | LOC_Os08g31560 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g04010 LOC_Os02g53140 LOC_Os03g64300 LOC_Os03g54770 LOC_Os02g56880 LOC_Os03g03150 LOC_Os01g69970 LOC_Os03g50350 LOC_Os01g08770 LOC_Os06g30680 LOC_Os03g19340 More.. |
| Downstream Genes | LOC_Os11g08400 LOC_Os08g38570 LOC_Os12g07874 LOC_Os12g07450 LOC_Os09g04110 LOC_Os09g12550 |
| Reference | |
|---|---|
| PubMed | 18755256 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g31560.1 |
| Rice Genome Annotation | LOC_Os08g31560.1 |
| Ricechip | LOC_Os08g31560.1 |
| KEGG | osa:4345539 dosa:Os08t0408200-01 |
| Entrez-Gene | 4345539 |