RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g31830.1 View Network Show in Genome Browser |
| Other Names | Os08g0412500 |
| Description | UPF0041 domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 19735719-19739231 Nucleotide Length: 324 |
| Protein-coding | LOC_Os08g31830 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g15260 LOC_Os04g20280 LOC_Os01g05694 LOC_Os02g35590 LOC_Os04g10400 LOC_Os01g63260 LOC_Os01g61240 LOC_Os03g05710 LOC_Os06g43930 LOC_Os01g05744 LOC_Os03g52400 More.. |
| Downstream Genes | LOC_Os12g10720 LOC_Os11g14040 LOC_Os12g10730 LOC_Os12g06200 LOC_Os11g38959 LOC_Os12g27070 LOC_Os09g20900 LOC_Os11g20790 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g31830.1 |
| Rice Genome Annotation | LOC_Os08g31830.1 |
| Ricechip | LOC_Os08g31830.1 |
| KEGG | osa:4345559 dosa:Os08t0412500-01 |
| Entrez-Gene | 4345559 |