RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g31870.1 View Network Show in Genome Browser |
| Other Names | Os08g0413000 |
| Description | cell division cycle protein 48, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 19756801-19760802 Nucleotide Length: 2547 |
| Protein-coding | LOC_Os08g31870 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g16670 LOC_Os07g42632 LOC_Os07g44410 LOC_Os03g62370 LOC_Os03g19990 LOC_Os07g09720 LOC_Os06g49140 LOC_Os05g49230 LOC_Os03g60750 |
| Downstream Genes | LOC_Os09g27270 LOC_Os10g36860 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00860 rn01100 rn01110 |
| Metacyc Pathways | CHLOROPHYLL-SYN |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g31870.1 |
| Rice Genome Annotation | LOC_Os08g31870.1 |
| Ricechip | LOC_Os08g31870.1 |
| KEGG | osa:4345563 dosa:Os08t0413000-00 |
| Entrez-Gene | 4345563 |