RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g32100.1 View Network Show in Genome Browser |
| Other Names | Os08g0416400 |
| Description | transposon protein, putative, CACTA, En/Spm sub-class, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 19913043-19918776 Nucleotide Length: 2760 |
| Protein-coding | LOC_Os08g32100 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g16369 LOC_Os01g72890 LOC_Os04g25550 LOC_Os04g41100 LOC_Os02g39010 LOC_Os01g03060 LOC_Os06g43710 LOC_Os08g05840 LOC_Os08g31240 LOC_Os05g01540 LOC_Os06g21470 More.. |
| Downstream Genes | LOC_Os09g07500 LOC_Os12g26030 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR530-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g32100.1 |
| Rice Genome Annotation | LOC_Os08g32100.1 |
| Ricechip | LOC_Os08g32100.1 |
| KEGG | osa:4345578 dosa:Os08t0416400-01 |
| Entrez-Gene | 4345578 |