RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g32500.1 View Network Show in Genome Browser |
| Other Names | Os08g0420600 |
| Description | nucleobase-ascorbate transporter, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 20129190-20133667 Nucleotide Length: 1602 |
| Protein-coding | LOC_Os08g32500 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g27320 LOC_Os08g31410 LOC_Os04g55800 LOC_Os03g09970 LOC_Os03g09980 LOC_Os06g05160 LOC_Os03g06520 LOC_Os03g09930 LOC_Os03g09940 LOC_Os01g52130 LOC_Os01g41050 More.. |
| Downstream Genes | LOC_Os09g06499 LOC_Os10g09870 LOC_Os12g28270 LOC_Os10g20650 LOC_Os10g04860 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1436 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g32500.1 |
| Rice Genome Annotation | LOC_Os08g32500.1 |
| Ricechip | LOC_Os08g32500.1 |
| KEGG | osa:4345589 dosa:Os08t0420600-01 |
| Entrez-Gene | 4345589 |