RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g32540.1 View Network Show in Genome Browser |
| Other Names | Os08g0421100 |
| Description | cyclin, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 20155988-20160942 Nucleotide Length: 1065 |
| Protein-coding | LOC_Os08g32540 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0030234 | enzyme regulator activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g52750 LOC_Os01g27940 LOC_Os05g33040 LOC_Os04g53680 LOC_Os04g46660 LOC_Os03g10070 LOC_Os03g02680 LOC_Os03g01850 LOC_Os02g05040 LOC_Os03g13480 |
| Downstream Genes | LOC_Os12g30020 LOC_Os10g41430 LOC_Os09g36440 LOC_Os08g42020 |
| Reference | |
|---|---|
| PubMed | 16435118 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g32540.1 |
| Rice Genome Annotation | LOC_Os08g32540.1 |
| Ricechip | LOC_Os08g32540.1 |
| KEGG | osa:9272445 dosa:Os08t0421100-00 |
| Entrez-Gene | 9272445 |