RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g32850.2 View Network Show in Genome Browser |
| Other Names | Os08g0424200 |
| Description | methylcrotonoyl-CoA carboxylase beta chain, mitochondrial precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 20359562-20366079 Nucleotide Length: 1308 |
| Protein-coding | LOC_Os08g32850 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g03480 LOC_Os02g43720 LOC_Os02g43710 LOC_Os05g22940 LOC_Os06g23760 LOC_Os06g46372 LOC_Os06g35700 LOC_Os06g35650 LOC_Os06g35590 LOC_Os08g01760 LOC_Os07g49520 More.. |
| Downstream Genes | LOC_Os12g41250 LOC_Os12g04020 LOC_Os11g04210 LOC_Os10g21910 LOC_Os09g07830 LOC_Os09g35800 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g32850.2 |
| Rice Genome Annotation | LOC_Os08g32850.2 |
| Ricechip | LOC_Os08g32850.2 |
| KEGG | osa:4345605 dosa:Os08t0424200-01 |
| Entrez-Gene | 4345605 |