RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g32990.1 View Network Show in Genome Browser |
| Other Names | Os08g0426000 |
| Description | DNA-directed RNA polymerase subunit, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 20468965-20471990 Nucleotide Length: 747 |
| Protein-coding | LOC_Os08g32990 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005654 | nucleoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g59140 LOC_Os05g05860 LOC_Os03g18410 LOC_Os03g28960 LOC_Os07g42450 LOC_Os03g08440 LOC_Os03g44484 LOC_Os04g41490 LOC_Os01g66580 LOC_Os06g48230 LOC_Os02g02510 More.. |
| Downstream Genes | LOC_Os09g02284 LOC_Os11g08940 LOC_Os12g09280 LOC_Os12g07980 LOC_Os10g35290 LOC_Os12g03090 LOC_Os11g03400 LOC_Os10g10990 LOC_Os12g37370 LOC_Os10g18220 LOC_Os11g11060 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g32990.1 |
| Rice Genome Annotation | LOC_Os08g32990.1 |
| Ricechip | LOC_Os08g32990.1 |
| KEGG | dosa:Os08t0426000-00 |