RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g33082.1 View Network Show in Genome Browser |
| Other Names | Os08g0427500 |
| Description | DNA-repair protein complementing XP-C cells, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 20559021-20566218 Nucleotide Length: 2643 |
| Protein-coding | LOC_Os08g33082 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g08300 LOC_Os01g57110 LOC_Os02g43470 LOC_Os06g15360 LOC_Os08g25060 LOC_Os04g45970 LOC_Os02g54910 LOC_Os01g04870 LOC_Os01g49680 LOC_Os03g58040 LOC_Os05g06760 More.. |
| Downstream Genes | LOC_Os08g33340 LOC_Os09g24200 LOC_Os08g35700 LOC_Os10g37490 LOC_Os08g39080 LOC_Os11g28350 LOC_Os12g09000 LOC_Os10g13700 LOC_Os10g07994 LOC_Os11g42160 LOC_Os09g16380 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g33082.1 |
| Rice Genome Annotation | LOC_Os08g33082.1 |
| Ricechip | LOC_Os08g33082.1 |
| KEGG | osa:4345619 dosa:Os08t0427500-01 |
| Entrez-Gene | 4345619 |