RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g33100.1 View Network Show in Genome Browser |
| Other Names | Os08g0427700 |
| Description | core histone H2A/H2B/H3/H4, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 20573200-20573993 Nucleotide Length: 405 |
| Protein-coding | LOC_Os08g33100 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g36500 LOC_Os05g39050 LOC_Os05g38740 LOC_Os04g49420 LOC_Os03g02780 LOC_Os02g45940 LOC_Os01g61920 LOC_Os01g62230 LOC_Os06g06510 LOC_Os06g06460 LOC_Os05g36280 More.. |
| Downstream Genes | LOC_Os10g39410 LOC_Os09g38020 LOC_Os09g26340 LOC_Os11g05730 LOC_Os08g38300 LOC_Os09g31180 LOC_Os12g34510 LOC_Os09g30310 LOC_Os12g25120 LOC_Os10g28230 LOC_Os08g38780 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g33100.1 |
| Rice Genome Annotation | LOC_Os08g33100.1 |
| Ricechip | LOC_Os08g33100.1 |
| KEGG | osa:9267462 dosa:Os08t0427700-00 |
| Entrez-Gene | 9267462 |