RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g33160.2 View Network Show in Genome Browser |
| Other Names | Os08g0428400 |
| Description | ZIM motif family protein, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 20624903-20627940 Nucleotide Length: 1284 |
| Protein-coding | LOC_Os08g33160 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g48534 LOC_Os03g32790 LOC_Os01g48270 LOC_Os06g23114 LOC_Os04g21320 LOC_Os02g44654 LOC_Os05g37830 LOC_Os04g38570 LOC_Os01g68450 LOC_Os02g10190 LOC_Os04g47250 More.. |
| Downstream Genes | LOC_Os09g25090 LOC_Os10g35180 LOC_Os11g47730 LOC_Os09g36520 |
| Reference | |
|---|---|
| PubMed | 19618278 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g33160.2 |
| Rice Genome Annotation | LOC_Os08g33160.2 |
| Ricechip | LOC_Os08g33160.2 |
| KEGG | osa:4345625 dosa:Os08t0428400-01 |
| Entrez-Gene | 4345625 |