RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g33200.1 View Network Show in Genome Browser |
| Other Names | Os08g0428900 |
| Description | 1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 20666125-20673557 Nucleotide Length: 4893 |
| Protein-coding | LOC_Os08g33200 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g46620 LOC_Os03g59020 LOC_Os03g04970 LOC_Os05g05470 LOC_Os02g22780 LOC_Os06g16290 LOC_Os03g08280 LOC_Os02g49610 LOC_Os02g15610 LOC_Os07g10660 LOC_Os03g05980 More.. |
| Downstream Genes | LOC_Os10g32550 LOC_Os10g37060 LOC_Os09g10930 LOC_Os11g29190 LOC_Os11g38959 LOC_Os11g08940 LOC_Os09g36440 LOC_Os09g32532 LOC_Os09g32520 LOC_Os09g32500 LOC_Os08g41300 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g33200.1 |
| Rice Genome Annotation | LOC_Os08g33200.1 |
| Ricechip | LOC_Os08g33200.1 |
| KEGG | osa:4345628 dosa:Os08t0428900-01 |
| Entrez-Gene | 4345628 |