RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g33710.1 View Network Show in Genome Browser |
| Other Names | Os08g0434100 |
| Description | ribonuclease T2 family domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 21050472-21052852 Nucleotide Length: 690 |
| Protein-coding | LOC_Os08g33710 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0004518 | nuclease activity | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g33450 LOC_Os02g48840 LOC_Os02g40830 LOC_Os03g51080 LOC_Os06g20340 LOC_Os02g07760 LOC_Os04g27060 LOC_Os04g26910 LOC_Os02g32430 LOC_Os03g56944 LOC_Os07g32800 More.. |
| Downstream Genes | LOC_Os08g36320 LOC_Os11g32240 LOC_Os10g42250 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2905 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g33710.1 |
| Rice Genome Annotation | LOC_Os08g33710.1 |
| Ricechip | LOC_Os08g33710.1 |
| KEGG | osa:4345656 dosa:Os08t0434100-01 |
| Entrez-Gene | 4345656 |