RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g33940.1 View Network Show in Genome Browser |
| Other Names | Os08g0437300 |
| Description | MYB family transcription factor, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 21240595-21242395 Nucleotide Length: 933 |
| Protein-coding | LOC_Os08g33940 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g06592 LOC_Os01g63940 LOC_Os02g56020 LOC_Os04g52700 LOC_Os02g47150 LOC_Os08g25200 LOC_Os02g35100 LOC_Os05g46330 LOC_Os04g28090 LOC_Os03g62379 LOC_Os02g45120 More.. |
| Downstream Genes | LOC_Os09g37020 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g33940.1 |
| Rice Genome Annotation | LOC_Os08g33940.1 |
| Ricechip | LOC_Os08g33940.1 |
| KEGG | dosa:Os08t0437300-00 |