RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g34010.1 View Network Show in Genome Browser |
| Other Names | Os08g0438400 |
| Description | ZF-HD protein dimerisation region containing protein, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 21307492-21309049 Nucleotide Length: 999 |
| Protein-coding | LOC_Os08g34010 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g03060 LOC_Os03g53310 LOC_Os06g48600 LOC_Os02g03540 LOC_Os02g43690 LOC_Os01g08450 LOC_Os05g51700 LOC_Os02g37420 LOC_Os01g63780 LOC_Os06g41360 LOC_Os04g39440 More.. |
| Downstream Genes | LOC_Os12g10630 LOC_Os11g13930 LOC_Os09g29130 LOC_Os09g24820 LOC_Os08g37400 LOC_Os12g01680 LOC_Os11g01600 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g34010.1 |
| Rice Genome Annotation | LOC_Os08g34010.1 |
| Ricechip | LOC_Os08g34010.1 |
| KEGG | osa:4345673 dosa:Os08t0438400-01 |
| Entrez-Gene | 4345673 |