RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g34140.1 View Network Show in Genome Browser |
| Other Names | Os08g0440000 |
| Description | vesicle transport v-SNARE protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 21400078-21403502 Nucleotide Length: 654 |
| Protein-coding | LOC_Os08g34140 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g51120 LOC_Os03g45260 LOC_Os01g37980 LOC_Os06g14370 LOC_Os03g50300 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR530-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g34140.1 |
| Rice Genome Annotation | LOC_Os08g34140.1 |
| Ricechip | LOC_Os08g34140.1 |
| KEGG | osa:4345680 dosa:Os08t0440000-01 |
| Entrez-Gene | 4345680 |