RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g34220.1 View Network Show in Genome Browser |
| Other Names | Os08g0440900 |
| Description | omega-6 fatty acid desaturase, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 21450962-21455969 Nucleotide Length: 1365 |
| Protein-coding | LOC_Os08g34220 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0015979 | photosynthesis | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g42660 LOC_Os03g19650 LOC_Os07g01030 LOC_Os03g54040 LOC_Os03g24020 LOC_Os01g04900 LOC_Os07g49310 LOC_Os01g54020 LOC_Os03g56869 LOC_Os05g22730 |
| Downstream Genes | LOC_Os09g16920 LOC_Os12g34890 LOC_Os09g12290 LOC_Os09g10760 LOC_Os09g36450 |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-782 PWY-762 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g34220.1 |
| Rice Genome Annotation | LOC_Os08g34220.1 |
| Ricechip | LOC_Os08g34220.1 |
| KEGG | osa:4345686 dosa:Os08t0440900-01 |
| Entrez-Gene | 4345686 |