RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g34270.1 View Network Show in Genome Browser |
| Other Names | Os08g0441400 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 21500904-21505354 Nucleotide Length: 372 |
| Protein-coding | LOC_Os08g34270 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g39830 LOC_Os01g73140 LOC_Os06g01700 LOC_Os04g45210 LOC_Os08g09250 LOC_Os08g27850 LOC_Os06g49160 |
| Downstream Genes | LOC_Os09g36890 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5541 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g34270.1 |
| Rice Genome Annotation | LOC_Os08g34270.1 |
| Ricechip | LOC_Os08g34270.1 |
| KEGG | osa:4345688 dosa:Os08t0441400-01 |
| Entrez-Gene | 4345688 |