RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g34280.1 View Network Show in Genome Browser |
| Other Names | Os08g0441500 |
| Description | cinnamoyl-CoA reductase, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 21506419-21513656 Nucleotide Length: 1086 |
| Protein-coding | LOC_Os08g34280 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0019748 | secondary metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g02160 LOC_Os05g51670 LOC_Os02g26814 LOC_Os06g25439 LOC_Os07g25420 LOC_Os02g11050 LOC_Os06g40620 LOC_Os08g28730 LOC_Os07g38830 LOC_Os06g22140 LOC_Os04g39040 More.. |
| Downstream Genes | LOC_Os09g09480 LOC_Os09g15420 LOC_Os12g02830 LOC_Os11g03060 LOC_Os10g35540 LOC_Os10g35520 LOC_Os10g35530 LOC_Os10g35490 LOC_Os10g35500 LOC_Os08g34720 LOC_Os12g43970 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00940 rn01100 rn01110 |
| Metacyc Pathways | PWY-6027 PWY-361 PWY-2582 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g34280.1 |
| Rice Genome Annotation | LOC_Os08g34280.1 |
| Ricechip | LOC_Os08g34280.1 |
| KEGG | osa:4345689 dosa:Os08t0441500-01 |
| Entrez-Gene | 4345689 |