RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g34740.1 View Network Show in Genome Browser |
| Other Names | Os08g0447200 |
| Description | SGT1 protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 21835042-21840598 Nucleotide Length: 1986 |
| Protein-coding | LOC_Os08g34740 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g50730 LOC_Os03g22900 LOC_Os02g55950 |
| Downstream Genes | LOC_Os10g06700 LOC_Os10g39620 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR166a-3p osa-miR166b-3p osa-miR166c-3p osa-miR166d-3p osa-miR166e-3p osa-miR166f osa-miR166m osa-miR166j-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g34740.1 |
| Rice Genome Annotation | LOC_Os08g34740.1 |
| Ricechip | LOC_Os08g34740.1 |
| KEGG | osa:4345711 dosa:Os08t0447200-01 |
| Entrez-Gene | 4345711 |