RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g35090.1 View Network Show in Genome Browser |
| Other Names | Os08g0452100 |
| Description | OsSub56 - Putative Subtilisin homologue, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 22111063-22113871 Nucleotide Length: 2391 |
| Protein-coding | LOC_Os08g35090 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g53200 LOC_Os04g38570 LOC_Os03g50810 LOC_Os04g58840 LOC_Os02g15690 LOC_Os03g08790 LOC_Os04g57800 LOC_Os06g16330 LOC_Os06g05550 LOC_Os01g42520 LOC_Os03g55930 More.. |
| Downstream Genes | LOC_Os10g25780 LOC_Os08g39550 LOC_Os10g41310 LOC_Os09g39680 LOC_Os10g26670 LOC_Os11g30430 LOC_Os09g28850 LOC_Os08g41370 LOC_Os12g39080 LOC_Os09g32988 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g35090.1 |
| Rice Genome Annotation | LOC_Os08g35090.1 |
| Ricechip | LOC_Os08g35090.1 |
| KEGG | osa:4345734 dosa:Os08t0452100-00 |
| Entrez-Gene | 4345734 |